Wikipedia:Wikiproject Metabolic Pathways/templates

From Wikipedia, the free encyclopedia

This of is a list of of templates useful for the wikiproject, see further below for the code for each template.

Templates available:

• Reaction Templates:

• Template:Biochemical Reaction
• Template:Enzymatic Reaction
• Template:Complex biochemical reaction
• Template:Complex Enzymatic Reaction

• Navigation Templates:

• Template:Glycolysis
• Template:Citric acid cycle
• Template:Urea cycle
• Template:Cellular respiration
• Template:Metabolism
• Template:Protein biosynthesis
• Template:Glucose metabolism
• Template:Metabolic pathways

• Reference Templates

• Template:KEGG enzyme
• Template:KEGG compound
• Template:KEGG reaction
• Template:PDB enzyme

• Article Tags:

• Template:Metabolic pathway
• Template:Metabolic pathway stub

• User Tags:

• Wikipedia:Wikiproject Metabolic Pathways/Userbox

• Infoboxes

• Template:Protbox
• Template:Chembox new

Contents 1 Reaction templates 1.1 Enzymatic Reaction 1.2 Biochemical Reaction 1.3 Complex Enzymatic Reaction 1.4 Complex Biochemical Reaction 2 Navigation templates 3 Reference templates 4 Common Minor Substrates/Products 5 Article tags 5.1 Stub Tag 5.2 Article of Interest 6 User Tags 7 Infoboxes 7.1 Protbox 7.2 Chembox

[edit] Reaction templates

[edit] Enzymatic Reaction

Current status: Use. Complete and ready for use.

{{Enzymatic Reaction
|foward_enzyme=
|reverse_enzyme=
|substrate=
|product=
|reaction_direction_(forward/reversible/reverse)=
|minor_foward_substrate(s)=
|minor_foward_product(s)=
|minor_reverse_substrate(s)=
|minor_reverse_product(s)=
|substrate_image=
|product_image=
}}

Gives, for example:

Glucose	Hexokinase		Glucose-6-phosphate
	ATP	ADP

[edit] Biochemical Reaction

Current status: Use. Complete and ready for use.

{{Biochemical Reaction
|reaction_A_major_substrate=
|reaction_A_major_substrate_image=
|reaction_A_foward_enzyme=
|reaction_A_reverse_enzyme=
|reaction_A_reaction_direction_(forward/reversible/reverse)=
|reaction_A_minor_reverse_product(s)=
|reaction_A_minor_reverse_substrate(s)=
|reaction_A_minor_foward_substrate(s)=
|reaction_A_minor_foward_product(s)=
|reaction_A_major_product=
|reaction_A_major_product_image=
|reaction_B_foward_enzyme=
|reaction_B_reverse_enzyme=
|reaction_B_reaction_direction_(forward/reversible/reverse)=
|reaction_B_minor_foward_substrate(s)=
|reaction_B_minor_foward_product(s)=
|reaction_B_minor_reverse_product(s)=
|reaction_B_minor_reverse_substrate(s)=
|reaction_B_major_product=
|reaction_B_major_product_image=
}}

Gives, for example:

Glucose	Hexokinase		Glucose 6-phosphate	Phosphoglucose isomerase		Fructose 6-phosphate
	ATP	ADP
				Phosphoglucose isomerase

[edit] Complex Enzymatic Reaction

Current status: Use. Complete and ready for use.

{{ Complex Enzymatic Reaction
|major_substrate_1=
|major_substrate_1_stoichiometric_constant=
|major_substrate_1_image=
|major_substrate_2=
|major_substrate_2_stoichiometric_constant=
|major_substrate_2_image=
|major_product_1=
|major_product_1_stoichiometric_constant=
|major_product_1_image=
|major_product_2=
|major_product_2_stoichiometric_constant=
|major_product_2_image=
|foward_enzyme=
|reverse_enzyme=
|reaction_direction_(forward/reversible/reverse)=
|minor_foward_substrate(s)=
|minor_foward_product(s)=
|minor_reverse_product(s)=
|minor_reverse_substrate(s)=
}}

Gives, for example:

A			B		E		C			D
NA	Image:A.png	+	NB	Image:B.png			NC	Image:C.png	+	ND	Image:D.png
					G	H
					I	J
					F

[edit] Complex Biochemical Reaction

Current status: Use. Complete and ready for use.

{{ Complex biochemical reaction
|reaction_A_major_substrate_1=
|reaction_A_major_substrate_1_image=
|reaction_A_major_substrate_1_stoichiometric_constant=
|reaction_A_major_substrate_2=
|reaction_A_major_substrate_2_image=
|reaction_A_major_substrate_2_stoichiometric_constant=
|reaction_A_foward_enzyme=
|reaction_A_reverse_enzyme=
|reaction_A_reaction_direction_(forward/reversible/reverse)=
|reaction_A_minor_reverse_product(s)=
|reaction_A_minor_reverse_substrate(s)=
|reaction_A_minor_foward_substrate(s)=
|reaction_A_minor_foward_product(s)=
|reaction_A_major_product_1=
|reaction_A_major_product_1_image=
|reaction_A_major_product_1_stoichiometric_constant=
|reaction_A_major_product_2=
|reaction_A_major_product_2_image=
|reaction_A_major_product_2_stoichiometric_constant=
|reaction_B_foward_enzyme=
|reaction_B_reverse_enzyme=
|reaction_B_reaction_direction_(forward/reversible/reverse)=
|reaction_B_minor_foward_substrate(s)=
|reaction_B_minor_foward_product(s)=
|reaction_B_minor_reverse_product(s)=
|reaction_B_minor_reverse_substrate(s)=
|reaction_B_major_product_1=
|reaction_B_major_product_1_image=
|reaction_B_major_product_1_stoichiometric_constant=
|reaction_B_major_product_2=
|reaction_B_major_product_2_image=
|reaction_B_major_product_2_stoichiometric_constant=
}}

Gives, for example:

A

B

G

C

D

I

E

F

NA

Image:A.png

+

NB

Image:B.png

NC

Image:C.png

+

ND

Image:D.png

NE

Image:E.png

+

NF

Image:F.png

N

O

P

Q

L

M

R

S

H

J

[edit] Navigation templates

{{Glycolysis}}

{{Citric acid cycle}}

{{Urea cycle}}

{{Metabolism}}

v • d • e Metabolism
Metabolism | Catabolism | Anabolism Metabolic pathway | Metabolic network | Cellular respiration (Anaerobic/Aerobic) Protein metabolism | Carbohydrate metabolism | Lipid metabolism

{{Protein biosynthesis}}

{{Glucose metabolism}}

v • d • e  Basic topics in Glucose metabolism
Aerobic respiration	Anaerobic respiration	Other metabolism
Glycolysis Pyruvate oxidation The Citric acid cycle (Kreb's cycle) Oxidative phosphorylation	Glycolysis Fermentation	Gluconeogenesis Glycogenesis Glycogenolysis Pentose phosphate pathway Glyoxylate cycle
Diseases: Phosphofructokinase Deficiency, Hyperglycemia, Hypoglycemia, Diabetes mellitus, Glycogen storage disease
Hormones: Insulin, Glucagon, Adrenalin, IGF1 and other insulin-like growth factors

{{Metabolic pathways}}

[edit] Reference templates

{{KEGG enzyme|2.7.1.69}}

Enzyme 2.7.1.69 at KEGG Pathway Database.

{{KEGG compound|C00668}}

Compound C00668 at KEGG Pathway Database.

{{KEGG reaction|R00959}

Reaction R00959 at KEGG Pathway Database.

{{PDB enzyme|1A0S}}

PDB 1A0S

[edit] Common Minor Substrates/Products

H₂O

H₂O

CO₂

CO₂

Inorganic Phosphate: P_i

P_i

ATP

ADP

CoA

[edit] Article tags

[edit] Stub Tag

Current status: Use. Complete and ready for use.

{{Metabolic pathway stub}}

{{Metabolic pathway stub|enzyme}}

{{Metabolic pathway stub|chemical}}

[edit] Article of Interest

Current status: Use. Complete and ready for use.

For talk pages

{{Metabolic pathway|comment}}

[edit] User Tags

{{Wikipedia:Wikiproject Metabolic Pathways/Userbox}}

[edit] Infoboxes

[edit] Protbox

{{Protbox
|Name=
|Photo=
|Caption=
|HGNCid=
|Symbol=
|AltSymbols=
|Chromosome=
|Arm=
|Band=
|LocusSupplementaryData =
|Gene=
|Gene_type=
|Protein_length=
|Molecular_weight=
|Structure=
|Type=
|Functions=
|Domains=
|Motifs=
|Alternative_products=
|Catalytic_activity=
|Cofactors=
|Enzyme_regulation=
|Km=
|Vmax=
|Biophysicochemical_properties=
|Diseases=
|Pharmaceuticals=
|Biotechnology=
|Taxa=
|Cells=
|Location=
|Mods=
|Names=
|Pathways=
|Interactions=
|Actions=
|Agonists=
|Antagonists=
|Accession_numbers=
|EntrezGene=
|OMIM=
|RefSeq=
|UniProt=
|PDB=
|ECnumber=
|Codes=
|Review=
|Pages=
}}

[edit] Chembox

{{chemboxnew
|ImageFile=
|IUPACName=
|OtherNames=
|Abbreviations=
|Formula=
|MolarMass=
|CASNo=
|Density=
|Solubility=
|MeltingPt=
|BoilingPt=
|pKa=
|pKb=
|IsoelectricPt=
|DeltaHf=
|DeltaHc=
|EINECS=
|PubChem=
|SMILES=
|InChI=
}}